Carnation DB

Dca59331.1

Annotation

7-exons
f-1
sp|D7LL83_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_481856#GO:0016021;GO:0005506;GO:0016491;GO:0006633#2F1P1C
sp|B6REN1_9BRAS#Putative C4-methy sterol oxidase#Boechera divaricarpa#Name=C4MO-1#GO:0016021;GO:0005506;GO:0016491;GO:0006633#2F1P1C
Repeat List (scaffold8843)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59331.1	1	260	265	83.01	260	85	3e-133
Target_name	Start	End	Length	Cov(%)
sp\|D7LL83_ARALL	1	260	260	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59331.1	1	264	265	83.39	264	84	1e-132
Target_name	Start	End	Length	Cov(%)
AT1G07420.1	1	265	266	99.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8843	Augus-PASA	mRNA	871	3617	.	-	.	ID=Dca59331.1;Parent=Dca59331
scaffold8843	Augus-PASA	exon	871	940	.	-	.	ID=Dca59331.1.exon1;Parent=Dca59331.1
scaffold8843	Augus-PASA	exon	1340	1420	.	-	.	ID=Dca59331.1.exon2;Parent=Dca59331.1
scaffold8843	Augus-PASA	exon	1523	1735	.	-	.	ID=Dca59331.1.exon3;Parent=Dca59331.1
scaffold8843	Augus-PASA	exon	1820	1939	.	-	.	ID=Dca59331.1.exon4;Parent=Dca59331.1
scaffold8843	Augus-PASA	exon	2076	2221	.	-	.	ID=Dca59331.1.exon5;Parent=Dca59331.1
scaffold8843	Augus-PASA	exon	2468	2605	.	-	.	ID=Dca59331.1.exon6;Parent=Dca59331.1
scaffold8843	Augus-PASA	exon	3588	3617	.	-	.	ID=Dca59331.1.exon7;Parent=Dca59331.1
scaffold8843	Augus-PASA	mRNA	871	2767	.	-	.	ID=Dca59331.2;Parent=Dca59331
scaffold8843	Augus-PASA	exon	871	940	.	-	.	ID=Dca59331.2.exon1;Parent=Dca59331.2
scaffold8843	Augus-PASA	exon	1340	1420	.	-	.	ID=Dca59331.2.exon2;Parent=Dca59331.2
scaffold8843	Augus-PASA	exon	1523	1735	.	-	.	ID=Dca59331.2.exon3;Parent=Dca59331.2
scaffold8843	Augus-PASA	exon	1820	1939	.	-	.	ID=Dca59331.2.exon4;Parent=Dca59331.2
scaffold8843	Augus-PASA	exon	2076	2221	.	-	.	ID=Dca59331.2.exon5;Parent=Dca59331.2
scaffold8843	Augus-PASA	exon	2468	2605	.	-	.	ID=Dca59331.2.exon6;Parent=Dca59331.2
scaffold8843	Augustus	exon	2705	2767	.	-	.	ID=Dca59331.2.exon7;Parent=Dca59331.2