Dca59364.1
Annotation
- 2-exons
- f-1
- sp|Q2R1A9_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g39790#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold8856)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59364.1 |
3 |
161 |
175 |
66.28 |
159 |
66 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R1A9_ORYSJ |
947 |
1122 |
1784 |
9.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59364.1 |
3 |
158 |
175 |
46.28 |
156 |
39 |
1e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
642 |
847 |
1539 |
13.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8856 |
Augustus |
mRNA |
8866 |
9555 |
. |
- |
. |
ID=Dca59364.1;Parent=Dca59364 |
| scaffold8856 |
Augustus |
exon |
8866 |
9116 |
. |
- |
. |
ID=Dca59364.1.exon1;Parent=Dca59364.1 |
| scaffold8856 |
Augustus |
exon |
9279 |
9555 |
. |
- |
. |
ID=Dca59364.1.exon2;Parent=Dca59364.1 |
