Dca59399.1
Annotation
- 4-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold887)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59399.1 |
3 |
391 |
1879 |
6.86 |
389 |
33 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
350 |
681 |
1788 |
18.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59399.1 |
665 |
1248 |
1879 |
9.73 |
584 |
31 |
7e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
10 |
550 |
591 |
91.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold887 |
Augustus |
mRNA |
13948 |
19865 |
. |
- |
. |
ID=Dca59399.1;Parent=Dca59399 |
| scaffold887 |
Augustus |
exon |
13948 |
14502 |
. |
- |
. |
ID=Dca59399.1.exon1;Parent=Dca59399.1 |
| scaffold887 |
Augustus |
exon |
14586 |
15699 |
. |
- |
. |
ID=Dca59399.1.exon2;Parent=Dca59399.1 |
| scaffold887 |
Augustus |
exon |
15834 |
19378 |
. |
- |
. |
ID=Dca59399.1.exon3;Parent=Dca59399.1 |
| scaffold887 |
Augustus |
exon |
19440 |
19865 |
. |
- |
. |
ID=Dca59399.1.exon4;Parent=Dca59399.1 |
