Carnation DB

Dca59403.1

Annotation

5-exons
f-1
sp|B9GHV9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_549981#unknown#0F0P0C
Repeat List (scaffold887)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59403.1	1	636	640	53.12	636	44	1e-146
Target_name	Start	End	Length	Cov(%)
sp\|B9GHV9_POPTR	6	783	785	99.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59403.1	1	607	640	47.96	607	43	7e-127
Target_name	Start	End	Length	Cov(%)
AT1G49870.1	6	705	828	84.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold887	Augus-PASA	mRNA	43367	46442	.	-	.	ID=Dca59403.1;Parent=Dca59403
scaffold887	Augus-PASA	exon	43367	43432	.	-	.	ID=Dca59403.1.exon1;Parent=Dca59403.1
scaffold887	Augustus	exon	43576	44980	.	-	.	ID=Dca59403.1.exon2;Parent=Dca59403.1
scaffold887	Augustus	exon	45100	45272	.	-	.	ID=Dca59403.1.exon3;Parent=Dca59403.1
scaffold887	Augustus	exon	45382	45540	.	-	.	ID=Dca59403.1.exon4;Parent=Dca59403.1
scaffold887	Augustus	exon	46323	46442	.	-	.	ID=Dca59403.1.exon5;Parent=Dca59403.1