Dca59478.1
Annotation
- 4-exons
- f-1
- sp|Q2QS92_ORYSJ#Transposable element protein, putative, Retrotrans_gag#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g24920#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold89)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59478.1 |
187 |
348 |
357 |
17.92 |
162 |
40 |
1e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QS92_ORYSJ |
77 |
234 |
759 |
20.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold89 |
Augustus |
mRNA |
75266 |
79084 |
. |
- |
. |
ID=Dca59478.1;Parent=Dca59478 |
| scaffold89 |
Augustus |
exon |
75266 |
76043 |
. |
- |
. |
ID=Dca59478.1.exon1;Parent=Dca59478.1 |
| scaffold89 |
Augustus |
exon |
78115 |
78213 |
. |
- |
. |
ID=Dca59478.1.exon2;Parent=Dca59478.1 |
| scaffold89 |
Augustus |
exon |
78733 |
78823 |
. |
- |
. |
ID=Dca59478.1.exon3;Parent=Dca59478.1 |
| scaffold89 |
Augustus |
exon |
78979 |
79084 |
. |
- |
. |
ID=Dca59478.1.exon4;Parent=Dca59478.1 |
