Dca59485.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold89)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59485.1 |
34 |
589 |
589 |
44.99 |
556 |
44 |
6e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
106 |
688 |
1313 |
44.4 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59485.1 |
309 |
588 |
589 |
14.77 |
280 |
31 |
3e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
378 |
657 |
1428 |
19.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold89 |
Augustus |
mRNA |
128506 |
130381 |
. |
- |
. |
ID=Dca59485.1;Parent=Dca59485 |
| scaffold89 |
Augustus |
exon |
128506 |
129354 |
. |
- |
. |
ID=Dca59485.1.exon1;Parent=Dca59485.1 |
| scaffold89 |
Augustus |
exon |
129461 |
130381 |
. |
- |
. |
ID=Dca59485.1.exon2;Parent=Dca59485.1 |
