Dca59512.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold89)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59512.1 |
171 |
312 |
316 |
18.03 |
142 |
38 |
2e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
352 |
500 |
964 |
15.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59512.1 |
235 |
312 |
316 |
7.91 |
78 |
33 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
896 |
970 |
1428 |
5.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold89 |
Augustus |
mRNA |
318975 |
321027 |
. |
- |
. |
ID=Dca59512.1;Parent=Dca59512 |
| scaffold89 |
Augustus |
exon |
318975 |
319386 |
. |
- |
. |
ID=Dca59512.1.exon1;Parent=Dca59512.1 |
| scaffold89 |
Augustus |
exon |
320489 |
321027 |
. |
- |
. |
ID=Dca59512.1.exon2;Parent=Dca59512.1 |
