Carnation DB

Dca59516.1

Annotation

6-exons
f-1
sp|F6HFN6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g03720#unknown#0F0P0C
AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:8880515-8882018 REVERSE LENGTH=223
Repeat List (scaffold890)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59516.1	116	255	255	40.39	140	74	8e-52
Target_name	Start	End	Length	Cov(%)
sp\|F6HFN6_VITVI	121	258	258	53.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59516.1	128	255	255	33.33	128	67	1e-41
Target_name	Start	End	Length	Cov(%)
AT1G25330.1	97	223	223	56.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold890	Augus-PASA	mRNA	24353	25643	.	-	.	ID=Dca59516.1;Parent=Dca59516
scaffold890	Augus-PASA	exon	24353	24451	.	-	.	ID=Dca59516.1.exon1;Parent=Dca59516.1
scaffold890	Augus-PASA	exon	24638	24718	.	-	.	ID=Dca59516.1.exon2;Parent=Dca59516.1
scaffold890	Augus-PASA	exon	24826	24894	.	-	.	ID=Dca59516.1.exon3;Parent=Dca59516.1
scaffold890	Augus-PASA	exon	24975	25040	.	-	.	ID=Dca59516.1.exon4;Parent=Dca59516.1
scaffold890	Augus-PASA	exon	25118	25237	.	-	.	ID=Dca59516.1.exon5;Parent=Dca59516.1
scaffold890	Augus-PASA	exon	25311	25643	.	-	.	ID=Dca59516.1.exon6;Parent=Dca59516.1