Carnation DB

Dca59521.1

Annotation

7-exons
f-1
sp|D7SJ78_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g02760#GO:0005779;GO:0007031#0F1P1C
AT1G48635.2 | Symbols: PEX3, PEX3-2 | peroxin 3 | chr1:17983951-17985966 FORWARD LENGTH=400
Repeat List (scaffold890)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59521.1	1	364	364	56.86	364	56	2e-112
Target_name	Start	End	Length	Cov(%)
sp\|D7SJ78_VITVI	1	373	373	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59521.1	1	360	364	48.07	360	44	2e-94
Target_name	Start	End	Length	Cov(%)
AT1G48635.2	1	397	400	99.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold890	Augus-PASA	mRNA	85757	90594	.	-	.	ID=Dca59521.1;Parent=Dca59521
scaffold890	Augus-PASA	exon	85757	86015	.	-	.	ID=Dca59521.1.exon1;Parent=Dca59521.1
scaffold890	Augus-PASA	exon	86738	86965	.	-	.	ID=Dca59521.1.exon2;Parent=Dca59521.1
scaffold890	Augus-PASA	exon	87659	87786	.	-	.	ID=Dca59521.1.exon3;Parent=Dca59521.1
scaffold890	Augus-PASA	exon	89603	89715	.	-	.	ID=Dca59521.1.exon4;Parent=Dca59521.1
scaffold890	Augus-PASA	exon	89812	90002	.	-	.	ID=Dca59521.1.exon5;Parent=Dca59521.1
scaffold890	Augus-PASA	exon	90106	90267	.	-	.	ID=Dca59521.1.exon6;Parent=Dca59521.1
scaffold890	Augus-PASA	exon	90581	90594	.	-	.	ID=Dca59521.1.exon7;Parent=Dca59521.1