Dca59558.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold8917)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59558.1 |
118 |
845 |
854 |
52.69 |
728 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
245 |
985 |
1501 |
49.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59558.1 |
206 |
830 |
854 |
27.63 |
625 |
38 |
5e-116
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
414 |
996 |
1539 |
37.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8917 |
Augustus |
mRNA |
8577 |
14462 |
. |
- |
. |
ID=Dca59558.1;Parent=Dca59558 |
| scaffold8917 |
Augustus |
exon |
8577 |
10073 |
. |
- |
. |
ID=Dca59558.1.exon1;Parent=Dca59558.1 |
| scaffold8917 |
Augustus |
exon |
10159 |
10914 |
. |
- |
. |
ID=Dca59558.1.exon2;Parent=Dca59558.1 |
| scaffold8917 |
Augustus |
exon |
14062 |
14193 |
. |
- |
. |
ID=Dca59558.1.exon3;Parent=Dca59558.1 |
| scaffold8917 |
Augustus |
exon |
14283 |
14462 |
. |
- |
. |
ID=Dca59558.1.exon4;Parent=Dca59558.1 |
