Carnation DB

Dca59671.1

Annotation

6-exons
f-1
sp|Q9FJV3_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold896)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59671.1	20	1359	1809	30.62	1340	39	0
Target_name	Start	End	Length	Cov(%)
sp\|Q9FJV3_ARATH	66	1470	1475	95.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59671.1	347	1344	1809	19.12	998	33	5e-166
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	361	1406	1428	73.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold896	Augustus	mRNA	79549	89618	.	+	.	ID=Dca59671.1;Parent=Dca59671
scaffold896	Augustus	exon	79549	79953	.	+	.	ID=Dca59671.1.exon1;Parent=Dca59671.1
scaffold896	Augustus	exon	80081	82194	.	+	.	ID=Dca59671.1.exon2;Parent=Dca59671.1
scaffold896	Augustus	exon	83165	84759	.	+	.	ID=Dca59671.1.exon3;Parent=Dca59671.1
scaffold896	Augustus	exon	88027	88910	.	+	.	ID=Dca59671.1.exon4;Parent=Dca59671.1
scaffold896	Augustus	exon	89098	89244	.	+	.	ID=Dca59671.1.exon5;Parent=Dca59671.1
scaffold896	Augustus	exon	89334	89618	.	+	.	ID=Dca59671.1.exon6;Parent=Dca59671.1