Dca59678.1
Annotation
- 4-exons
- f-1
- sp|B9GZ47_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_854136#GO:0016788#1F0P0C
- Os06t0597250-00 Similar to B protein.
- Repeat List (scaffold8963)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59678.1 |
74 |
116 |
222 |
12.61 |
43 |
66 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GZ47_POPTR |
3 |
45 |
178 |
24.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59678.1 |
74 |
116 |
222 |
11.26 |
43 |
59 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0872900-01 |
168 |
210 |
359 |
11.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8963 |
Augustus |
mRNA |
1685 |
5809 |
. |
- |
. |
ID=Dca59678.1;Parent=Dca59678 |
| scaffold8963 |
Augustus |
exon |
1685 |
1895 |
. |
- |
. |
ID=Dca59678.1.exon1;Parent=Dca59678.1 |
| scaffold8963 |
Augustus |
exon |
4571 |
4679 |
. |
- |
. |
ID=Dca59678.1.exon2;Parent=Dca59678.1 |
| scaffold8963 |
Augustus |
exon |
4908 |
5036 |
. |
- |
. |
ID=Dca59678.1.exon3;Parent=Dca59678.1 |
| scaffold8963 |
Augustus |
exon |
5590 |
5809 |
. |
- |
. |
ID=Dca59678.1.exon4;Parent=Dca59678.1 |
