Carnation DB

Dca59721.1

Annotation

19-exons
f-1
sp|B9HGV2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_802804#GO:0005524;GO:0004674#2F0P0C
AT1G56140.1 | Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:21001708-21007725 REVERSE LENGTH=1033
Repeat List (scaffold898)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59721.1	16	873	877	61.34	858	55	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HGV2_POPTR	16	993	1036	94.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59721.1	13	868	877	57.12	856	52	0
Target_name	Start	End	Length	Cov(%)
AT1G56140.1	9	986	1033	94.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold898	Augustus	mRNA	70330	83118	.	+	.	ID=Dca59721.1;Parent=Dca59721
scaffold898	Augustus	exon	70330	70450	.	+	.	ID=Dca59721.1.exon1;Parent=Dca59721.1
scaffold898	Augustus	exon	71282	71471	.	+	.	ID=Dca59721.1.exon2;Parent=Dca59721.1
scaffold898	Augustus	exon	73250	73321	.	+	.	ID=Dca59721.1.exon3;Parent=Dca59721.1
scaffold898	Augustus	exon	73584	73655	.	+	.	ID=Dca59721.1.exon4;Parent=Dca59721.1
scaffold898	Augustus	exon	73777	73848	.	+	.	ID=Dca59721.1.exon5;Parent=Dca59721.1
scaffold898	Augustus	exon	73993	74064	.	+	.	ID=Dca59721.1.exon6;Parent=Dca59721.1
scaffold898	Augustus	exon	74347	74418	.	+	.	ID=Dca59721.1.exon7;Parent=Dca59721.1
scaffold898	Augustus	exon	75337	75408	.	+	.	ID=Dca59721.1.exon8;Parent=Dca59721.1
scaffold898	Augustus	exon	75517	75582	.	+	.	ID=Dca59721.1.exon9;Parent=Dca59721.1
scaffold898	Augustus	exon	76325	76390	.	+	.	ID=Dca59721.1.exon10;Parent=Dca59721.1
scaffold898	Augustus	exon	77509	77573	.	+	.	ID=Dca59721.1.exon11;Parent=Dca59721.1
scaffold898	Augustus	exon	78761	79131	.	+	.	ID=Dca59721.1.exon12;Parent=Dca59721.1
scaffold898	Augustus	exon	79927	80125	.	+	.	ID=Dca59721.1.exon13;Parent=Dca59721.1
scaffold898	Augustus	exon	80242	80391	.	+	.	ID=Dca59721.1.exon14;Parent=Dca59721.1
scaffold898	Augustus	exon	80615	80727	.	+	.	ID=Dca59721.1.exon15;Parent=Dca59721.1
scaffold898	Augustus	exon	80935	81145	.	+	.	ID=Dca59721.1.exon16;Parent=Dca59721.1
scaffold898	Augustus	exon	81239	81470	.	+	.	ID=Dca59721.1.exon17;Parent=Dca59721.1
scaffold898	Augustus	exon	82337	82487	.	+	.	ID=Dca59721.1.exon18;Parent=Dca59721.1
scaffold898	Augustus	exon	82852	83118	.	+	.	ID=Dca59721.1.exon19;Parent=Dca59721.1