Carnation DB

Dca5984.1

Annotation

5-exons
f-1
sp|F6H165_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g08490#GO:0016020#0F0P1C
Repeat List (scaffold1232)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5984.1	2	74	271	16.23	73	59	1e-18
Target_name	Start	End	Length	Cov(%)
sp\|F6H165_VITVI	211	284	514	14.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5984.1	1	67	271	15.49	67	63	5e-20
Target_name	Start	End	Length	Cov(%)
Os12t0633600-01	425	490	764	8.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1232	Augustus	mRNA	17542	21806	.	+	.	ID=Dca5984.1;Parent=Dca5984
scaffold1232	Augustus	exon	17542	17745	.	+	.	ID=Dca5984.1.exon1;Parent=Dca5984.1
scaffold1232	Augustus	exon	20461	20694	.	+	.	ID=Dca5984.1.exon2;Parent=Dca5984.1
scaffold1232	Augustus	exon	21234	21278	.	+	.	ID=Dca5984.1.exon3;Parent=Dca5984.1
scaffold1232	Augustus	exon	21344	21524	.	+	.	ID=Dca5984.1.exon4;Parent=Dca5984.1
scaffold1232	Augustus	exon	21655	21806	.	+	.	ID=Dca5984.1.exon5;Parent=Dca5984.1