Dca59867.1
Annotation
- 2-exons
- f-1
- sp|A5B112_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_023404#GO:0004864;GO:0043666;GO:0009966#1F2P0C
- AT5G52220.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr5:21207097-21207678 REVERSE LENGTH=145
- Repeat List (scaffold90)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59867.1 |
4 |
121 |
125 |
64 |
118 |
68 |
5e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B112_VITVI |
3 |
119 |
305 |
38.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59867.1 |
4 |
124 |
125 |
57.6 |
121 |
60 |
6e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G52220.1 |
3 |
117 |
145 |
79.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold90 |
Augustus |
mRNA |
51622 |
52740 |
. |
+ |
. |
ID=Dca59867.1;Parent=Dca59867 |
| scaffold90 |
Augustus |
exon |
51622 |
51774 |
. |
+ |
. |
ID=Dca59867.1.exon1;Parent=Dca59867.1 |
| scaffold90 |
Augustus |
exon |
52516 |
52740 |
. |
+ |
. |
ID=Dca59867.1.exon2;Parent=Dca59867.1 |
