Carnation DB

Dca59870.1

Annotation

6-exons
f-1
sp|F6HP13_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0100g01230#GO:0004864;GO:0043666;GO:0009966#1F2P0C
Os05t0301600-01 Protein phosphatase inhibitor 2 (IPP-2) family protein.
Repeat List (scaffold90)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59870.1	40	183	223	42.6	144	66	5e-45
Target_name	Start	End	Length	Cov(%)
sp\|F6HP13_VITVI	4	144	181	77.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59870.1	42	184	223	39.46	143	62	2e-40
Target_name	Start	End	Length	Cov(%)
Os05t0301600-01	5	139	166	81.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold90	Augustus	mRNA	61620	64728	.	+	.	ID=Dca59870.1;Parent=Dca59870
scaffold90	Augustus	exon	61620	61634	.	+	.	ID=Dca59870.1.exon1;Parent=Dca59870.1
scaffold90	Augustus	exon	62250	62272	.	+	.	ID=Dca59870.1.exon2;Parent=Dca59870.1
scaffold90	Augus-PASA	exon	63508	63582	.	+	.	ID=Dca59870.1.exon3;Parent=Dca59870.1
scaffold90	Augus-PASA	exon	63670	63791	.	+	.	ID=Dca59870.1.exon4;Parent=Dca59870.1
scaffold90	Augus-PASA	exon	63911	64108	.	+	.	ID=Dca59870.1.exon5;Parent=Dca59870.1
scaffold90	Augus-PASA	exon	64490	64728	.	+	.	ID=Dca59870.1.exon6;Parent=Dca59870.1