Dca59876.1
Annotation
- 4-exons
- f-1
- sp|F2DXL3_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0016021;GO:0004252;GO:0006508#1F1P1C
- Os09t0525900-01 Peptidase S54, rhomboid domain containing protein.
- Repeat List (scaffold90)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59876.1 |
1 |
195 |
195 |
57.43 |
195 |
55 |
4e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F2DXL3_HORVD |
96 |
300 |
321 |
63.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59876.1 |
1 |
195 |
195 |
55.89 |
195 |
53 |
1e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0525900-01 |
98 |
302 |
324 |
63.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold90 |
Augustus |
mRNA |
124424 |
125792 |
. |
+ |
. |
ID=Dca59876.1;Parent=Dca59876 |
| scaffold90 |
Augustus |
exon |
124424 |
124565 |
. |
+ |
. |
ID=Dca59876.1.exon1;Parent=Dca59876.1 |
| scaffold90 |
Augustus |
exon |
125033 |
125196 |
. |
+ |
. |
ID=Dca59876.1.exon2;Parent=Dca59876.1 |
| scaffold90 |
Augustus |
exon |
125319 |
125551 |
. |
+ |
. |
ID=Dca59876.1.exon3;Parent=Dca59876.1 |
| scaffold90 |
Augustus |
exon |
125744 |
125792 |
. |
+ |
. |
ID=Dca59876.1.exon4;Parent=Dca59876.1 |
