Carnation DB

Dca59878.1

Annotation

9-exons
f-1
sp|B9I4D6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570500#GO:0005634;GO:0003712#1F0P1C
AT5G62090.1 | Symbols: SLK2 | SEUSS-like 2 | chr5:24935221-24938540 REVERSE LENGTH=816
Repeat List (scaffold90)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59878.1	1	833	833	65.9	833	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I4D6_POPTR	6	873	873	99.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59878.1	300	701	833	30.97	402	61	1e-145
Target_name	Start	End	Length	Cov(%)
AT5G62090.1	291	709	816	51.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold90	Augustus	mRNA	145076	149675	.	-	.	ID=Dca59878.1;Parent=Dca59878
scaffold90	Augustus	exon	145076	145896	.	-	.	ID=Dca59878.1.exon1;Parent=Dca59878.1
scaffold90	Augustus	exon	146005	146074	.	-	.	ID=Dca59878.1.exon2;Parent=Dca59878.1
scaffold90	Augustus	exon	146159	146252	.	-	.	ID=Dca59878.1.exon3;Parent=Dca59878.1
scaffold90	Augustus	exon	146375	146475	.	-	.	ID=Dca59878.1.exon4;Parent=Dca59878.1
scaffold90	Augustus	exon	146640	146708	.	-	.	ID=Dca59878.1.exon5;Parent=Dca59878.1
scaffold90	Augustus	exon	146817	147031	.	-	.	ID=Dca59878.1.exon6;Parent=Dca59878.1
scaffold90	Augustus	exon	147874	147922	.	-	.	ID=Dca59878.1.exon7;Parent=Dca59878.1
scaffold90	Augustus	exon	148015	148146	.	-	.	ID=Dca59878.1.exon8;Parent=Dca59878.1
scaffold90	Augustus	exon	148725	149675	.	-	.	ID=Dca59878.1.exon9;Parent=Dca59878.1