Carnation DB

Dca59929.1

Annotation

7-exons
f-1
sp|B9HUD3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_726410#unknown#0F0P0C
Os01t0727400-01 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 domain containing protein.
Repeat List (scaffold901)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59929.1	11	248	248	65.32	238	69	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9HUD3_POPTR	18	225	225	92.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59929.1	11	247	248	61.29	237	65	2e-85
Target_name	Start	End	Length	Cov(%)
Os01t0727400-01	18	228	230	91.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold901	Augus-PASA	mRNA	4548	8633	.	-	.	ID=Dca59929.1;Parent=Dca59929
scaffold901	Augus-PASA	exon	4548	4736	.	-	.	ID=Dca59929.1.exon1;Parent=Dca59929.1
scaffold901	Augus-PASA	exon	4972	5070	.	-	.	ID=Dca59929.1.exon2;Parent=Dca59929.1
scaffold901	Augus-PASA	exon	5142	5222	.	-	.	ID=Dca59929.1.exon3;Parent=Dca59929.1
scaffold901	Augus-PASA	exon	5646	5737	.	-	.	ID=Dca59929.1.exon4;Parent=Dca59929.1
scaffold901	Augustus	exon	7040	7131	.	-	.	ID=Dca59929.1.exon5;Parent=Dca59929.1
scaffold901	Augustus	exon	8279	8327	.	-	.	ID=Dca59929.1.exon6;Parent=Dca59929.1
scaffold901	Augustus	exon	8489	8633	.	-	.	ID=Dca59929.1.exon7;Parent=Dca59929.1