Dca59983.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold9031)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59983.1 |
26 |
298 |
324 |
31.79 |
273 |
35 |
3e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
87 |
387 |
1501 |
20.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59983.1 |
44 |
150 |
324 |
10.18 |
107 |
31 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
149 |
255 |
296 |
36.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9031 |
Augustus |
mRNA |
17697 |
19081 |
. |
+ |
. |
ID=Dca59983.1;Parent=Dca59983 |
| scaffold9031 |
Augustus |
exon |
17697 |
17758 |
. |
+ |
. |
ID=Dca59983.1.exon1;Parent=Dca59983.1 |
| scaffold9031 |
Augustus |
exon |
18169 |
19081 |
. |
+ |
. |
ID=Dca59983.1.exon2;Parent=Dca59983.1 |
