Dca59998.1
Annotation
- 4-exons
- f-1
- sp|D7KCT9_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_473029#GO:0005524;GO:0031072;GO:0003676;GO:0051082;GO:0008270;GO:0006457;GO:0009408#5F2P0C
- AT1G28210.2 | Symbols: ATJ1 | DNAJ heat shock family protein | chr1:9854598-9859977 FORWARD LENGTH=427
- Repeat List (scaffold9039)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59998.1 |
1 |
89 |
89 |
68.53 |
89 |
69 |
4e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KCT9_ARALL |
313 |
399 |
427 |
20.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59998.1 |
1 |
89 |
89 |
69.66 |
89 |
70 |
4e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G28210.2 |
313 |
399 |
427 |
20.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9039 |
Augustus |
mRNA |
1516 |
2796 |
. |
- |
. |
ID=Dca59998.1;Parent=Dca59998 |
| scaffold9039 |
Augustus |
exon |
1516 |
1605 |
. |
- |
. |
ID=Dca59998.1.exon1;Parent=Dca59998.1 |
| scaffold9039 |
Augustus |
exon |
1955 |
2030 |
. |
- |
. |
ID=Dca59998.1.exon2;Parent=Dca59998.1 |
| scaffold9039 |
Augustus |
exon |
2435 |
2483 |
. |
- |
. |
ID=Dca59998.1.exon3;Parent=Dca59998.1 |
| scaffold9039 |
Augustus |
exon |
2743 |
2796 |
. |
- |
. |
ID=Dca59998.1.exon4;Parent=Dca59998.1 |
