Carnation DB

Dca60028.1

Annotation

11-exons
f-1
sp|B9H4S1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1077353#unknown#0F0P0C
sp|Q4ABN8_BRARP#80A08_29#Brassica rapa subsp pekinensis (Chinese cabbage) (Brassica pekinensis)#Name=80A08_29#unknown#0F0P0C
Repeat List (scaffold905)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60028.1	29	314	319	59.24	286	65	4e-109
Target_name	Start	End	Length	Cov(%)
sp\|B9H4S1_POPTR	98	389	400	73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60028.1	34	316	319	55.17	283	62	3e-101
Target_name	Start	End	Length	Cov(%)
AT5G10320.1	121	403	403	70.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold905	Augustus	mRNA	57529	59909	.	+	.	ID=Dca60028.1;Parent=Dca60028
scaffold905	Augustus	exon	57529	57684	.	+	.	ID=Dca60028.1.exon1;Parent=Dca60028.1
scaffold905	Augustus	exon	57801	57902	.	+	.	ID=Dca60028.1.exon2;Parent=Dca60028.1
scaffold905	Augustus	exon	58049	58123	.	+	.	ID=Dca60028.1.exon3;Parent=Dca60028.1
scaffold905	Augustus	exon	58209	58297	.	+	.	ID=Dca60028.1.exon4;Parent=Dca60028.1
scaffold905	Augustus	exon	58384	58462	.	+	.	ID=Dca60028.1.exon5;Parent=Dca60028.1
scaffold905	Augustus	exon	58654	58746	.	+	.	ID=Dca60028.1.exon6;Parent=Dca60028.1
scaffold905	Augustus	exon	59079	59143	.	+	.	ID=Dca60028.1.exon7;Parent=Dca60028.1
scaffold905	Augustus	exon	59261	59273	.	+	.	ID=Dca60028.1.exon8;Parent=Dca60028.1
scaffold905	Augustus	exon	59369	59449	.	+	.	ID=Dca60028.1.exon9;Parent=Dca60028.1
scaffold905	Augustus	exon	59599	59707	.	+	.	ID=Dca60028.1.exon10;Parent=Dca60028.1
scaffold905	Augustus	exon	59812	59909	.	+	.	ID=Dca60028.1.exon11;Parent=Dca60028.1