Carnation DB

Dca60058.1

Annotation

5-exons
f-1
sp|A9PE83_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0000166#2F0P0C
AT4G17720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:9862660-9864498 REVERSE LENGTH=313
Repeat List (scaffold906)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60058.1	1	285	285	72.28	285	72	8e-111
Target_name	Start	End	Length	Cov(%)
sp\|A9PE83_POPTR	1	280	280	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60058.1	1	262	285	63.5	262	68	2e-95
Target_name	Start	End	Length	Cov(%)
AT4G17720.1	1	266	313	84.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold906	Augustus	mRNA	68691	71577	.	-	.	ID=Dca60058.1;Parent=Dca60058
scaffold906	Augustus	exon	68691	69278	.	-	.	ID=Dca60058.1.exon1;Parent=Dca60058.1
scaffold906	Augustus	exon	69359	69442	.	-	.	ID=Dca60058.1.exon2;Parent=Dca60058.1
scaffold906	Augustus	exon	69865	69940	.	-	.	ID=Dca60058.1.exon3;Parent=Dca60058.1
scaffold906	Augustus	exon	70024	70127	.	-	.	ID=Dca60058.1.exon4;Parent=Dca60058.1
scaffold906	Augustus	exon	71572	71577	.	-	.	ID=Dca60058.1.exon5;Parent=Dca60058.1