Dca60129.1
Annotation
- 3-exons
- f-1
- sp|B9H9F3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561816#unknown#0F0P0C
- AT2G25670.1 | Symbols: | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). | chr2:10929062-10930619 REVERSE LENGTH=318
- Repeat List (scaffold9097)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60129.1 |
1 |
313 |
313 |
59.74 |
313 |
58 |
7e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H9F3_POPTR |
1 |
322 |
322 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60129.1 |
1 |
313 |
313 |
56.54 |
313 |
53 |
6e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G25670.1 |
1 |
318 |
318 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9097 |
Augus-PASA |
mRNA |
1333 |
3683 |
. |
+ |
. |
ID=Dca60129.1;Parent=Dca60129 |
| scaffold9097 |
Augus-PASA |
exon |
1333 |
1650 |
. |
+ |
. |
ID=Dca60129.1.exon1;Parent=Dca60129.1 |
| scaffold9097 |
Augus-PASA |
exon |
2900 |
3137 |
. |
+ |
. |
ID=Dca60129.1.exon2;Parent=Dca60129.1 |
| scaffold9097 |
Augus-PASA |
exon |
3298 |
3683 |
. |
+ |
. |
ID=Dca60129.1.exon3;Parent=Dca60129.1 |
