Dca60130.1
Annotation
- 3-exons
- f-1
- sp|B9P5D9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_588329#GO:0005488#1F0P0C
- AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:2014440-2015942 REVERSE LENGTH=500
- Repeat List (scaffold9097)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60130.1 |
1 |
265 |
299 |
42.14 |
265 |
41 |
5e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9P5D9_POPTR |
131 |
437 |
616 |
49.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60130.1 |
1 |
266 |
299 |
34.78 |
266 |
37 |
9e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G06580.1 |
86 |
360 |
500 |
55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9097 |
Augustus |
mRNA |
6135 |
7181 |
. |
- |
. |
ID=Dca60130.1;Parent=Dca60130 |
| scaffold9097 |
Augustus |
exon |
6135 |
6482 |
. |
- |
. |
ID=Dca60130.1.exon1;Parent=Dca60130.1 |
| scaffold9097 |
Augustus |
exon |
6577 |
6945 |
. |
- |
. |
ID=Dca60130.1.exon2;Parent=Dca60130.1 |
| scaffold9097 |
Augustus |
exon |
6999 |
7181 |
. |
- |
. |
ID=Dca60130.1.exon3;Parent=Dca60130.1 |
