Carnation DB

Dca60169.1

Annotation

12-exons
f-1
sp|B9I9M1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_898175#unknown#0F0P0C
Os05t0155700-01 Ribosomal protein S2, conserved site domain containing protein.
Repeat List (scaffold910)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60169.1	18	436	436	61.92	419	57	3e-147
Target_name	Start	End	Length	Cov(%)
sp\|B9I9M1_POPTR	10	481	481	98.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60169.1	25	436	436	55.27	412	52	1e-132
Target_name	Start	End	Length	Cov(%)
Os05t0155700-01	28	491	492	94.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold910	Augustus	mRNA	20304	27861	.	+	.	ID=Dca60169.1;Parent=Dca60169
scaffold910	Augustus	exon	20304	20516	.	+	.	ID=Dca60169.1.exon1;Parent=Dca60169.1
scaffold910	Augustus	exon	21412	21549	.	+	.	ID=Dca60169.1.exon2;Parent=Dca60169.1
scaffold910	Augustus	exon	21914	21995	.	+	.	ID=Dca60169.1.exon3;Parent=Dca60169.1
scaffold910	Augustus	exon	22501	22577	.	+	.	ID=Dca60169.1.exon4;Parent=Dca60169.1
scaffold910	Augustus	exon	22860	22966	.	+	.	ID=Dca60169.1.exon5;Parent=Dca60169.1
scaffold910	Augustus	exon	24045	24162	.	+	.	ID=Dca60169.1.exon6;Parent=Dca60169.1
scaffold910	Augustus	exon	25153	25234	.	+	.	ID=Dca60169.1.exon7;Parent=Dca60169.1
scaffold910	Augustus	exon	26667	26704	.	+	.	ID=Dca60169.1.exon8;Parent=Dca60169.1
scaffold910	Augustus	exon	26784	26862	.	+	.	ID=Dca60169.1.exon9;Parent=Dca60169.1
scaffold910	Augustus	exon	27010	27101	.	+	.	ID=Dca60169.1.exon10;Parent=Dca60169.1
scaffold910	Augustus	exon	27345	27488	.	+	.	ID=Dca60169.1.exon11;Parent=Dca60169.1
scaffold910	Augustus	exon	27721	27861	.	+	.	ID=Dca60169.1.exon12;Parent=Dca60169.1