Dca60194.1
Annotation
- 3-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold911)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60194.1 |
395 |
555 |
556 |
21.04 |
161 |
73 |
7e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
558 |
716 |
1307 |
12.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60194.1 |
392 |
529 |
556 |
10.79 |
138 |
43 |
9e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
622 |
762 |
1401 |
10.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold911 |
Augustus |
mRNA |
40546 |
43435 |
. |
- |
. |
ID=Dca60194.1;Parent=Dca60194 |
| scaffold911 |
Augustus |
exon |
40546 |
41036 |
. |
- |
. |
ID=Dca60194.1.exon1;Parent=Dca60194.1 |
| scaffold911 |
Augustus |
exon |
41358 |
41655 |
. |
- |
. |
ID=Dca60194.1.exon2;Parent=Dca60194.1 |
| scaffold911 |
Augustus |
exon |
42554 |
43435 |
. |
- |
. |
ID=Dca60194.1.exon3;Parent=Dca60194.1 |
