Carnation DB

Dca6020.1

Annotation

6-exons
f-1
sp|B9HUH9_POPTR#White-brown-complex ABC transporter family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_228054#GO:0005524;GO:0016887#2F0P0C
Repeat List (scaffold1234)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6020.1	2	483	483	70.6	482	70	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HUH9_POPTR	581	1067	1067	45.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6020.1	2	483	483	67.08	482	68	0
Target_name	Start	End	Length	Cov(%)
AT1G53390.1	629	1109	1109	43.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1234	Augustus	mRNA	35979	38610	.	-	.	ID=Dca6020.1;Parent=Dca6020
scaffold1234	Augustus	exon	35979	36135	.	-	.	ID=Dca6020.1.exon1;Parent=Dca6020.1
scaffold1234	Augustus	exon	36317	36450	.	-	.	ID=Dca6020.1.exon2;Parent=Dca6020.1
scaffold1234	Augustus	exon	36714	37003	.	-	.	ID=Dca6020.1.exon3;Parent=Dca6020.1
scaffold1234	Augustus	exon	37197	37345	.	-	.	ID=Dca6020.1.exon4;Parent=Dca6020.1
scaffold1234	Augustus	exon	37434	37913	.	-	.	ID=Dca6020.1.exon5;Parent=Dca6020.1
scaffold1234	Augustus	exon	38369	38610	.	-	.	ID=Dca6020.1.exon6;Parent=Dca6020.1