Carnation DB

Dca60311.1

Annotation

30-exons
f-1
sp|B9HSM0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_567249#GO:0030132;GO:0030130;GO:0005488;GO:0005198;GO:0006886;GO:0016192#2F2P2C
Repeat List (scaffold916)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60311.1	1	1657	1707	89.68	1657	93	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HSM0_POPTR	1	1657	1705	97.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60311.1	1	1657	1707	88.04	1657	91	0
Target_name	Start	End	Length	Cov(%)
AT3G11130.1	1	1657	1705	97.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold916	Augustus	mRNA	47000	57910	.	-	.	ID=Dca60311.1;Parent=Dca60311
scaffold916	Augustus	exon	47000	47167	.	-	.	ID=Dca60311.1.exon1;Parent=Dca60311.1
scaffold916	Augustus	exon	47297	47407	.	-	.	ID=Dca60311.1.exon2;Parent=Dca60311.1
scaffold916	Augustus	exon	47583	47705	.	-	.	ID=Dca60311.1.exon3;Parent=Dca60311.1
scaffold916	Augustus	exon	48112	48297	.	-	.	ID=Dca60311.1.exon4;Parent=Dca60311.1
scaffold916	Augustus	exon	48421	48591	.	-	.	ID=Dca60311.1.exon5;Parent=Dca60311.1
scaffold916	Augustus	exon	48686	49171	.	-	.	ID=Dca60311.1.exon6;Parent=Dca60311.1
scaffold916	Augustus	exon	49613	50615	.	-	.	ID=Dca60311.1.exon7;Parent=Dca60311.1
scaffold916	Augustus	exon	50704	50982	.	-	.	ID=Dca60311.1.exon8;Parent=Dca60311.1
scaffold916	Augustus	exon	51063	51199	.	-	.	ID=Dca60311.1.exon9;Parent=Dca60311.1
scaffold916	Augustus	exon	51314	51566	.	-	.	ID=Dca60311.1.exon10;Parent=Dca60311.1
scaffold916	Augustus	exon	51659	51771	.	-	.	ID=Dca60311.1.exon11;Parent=Dca60311.1
scaffold916	Augustus	exon	51876	51980	.	-	.	ID=Dca60311.1.exon12;Parent=Dca60311.1
scaffold916	Augustus	exon	52061	52123	.	-	.	ID=Dca60311.1.exon13;Parent=Dca60311.1
scaffold916	Augustus	exon	52218	52352	.	-	.	ID=Dca60311.1.exon14;Parent=Dca60311.1
scaffold916	Augustus	exon	52438	52521	.	-	.	ID=Dca60311.1.exon15;Parent=Dca60311.1
scaffold916	Augustus	exon	52746	52832	.	-	.	ID=Dca60311.1.exon16;Parent=Dca60311.1
scaffold916	Augustus	exon	52943	53002	.	-	.	ID=Dca60311.1.exon17;Parent=Dca60311.1
scaffold916	Augustus	exon	53144	53260	.	-	.	ID=Dca60311.1.exon18;Parent=Dca60311.1
scaffold916	Augustus	exon	53353	53550	.	-	.	ID=Dca60311.1.exon19;Parent=Dca60311.1
scaffold916	Augustus	exon	53736	53852	.	-	.	ID=Dca60311.1.exon20;Parent=Dca60311.1
scaffold916	Augustus	exon	54157	54222	.	-	.	ID=Dca60311.1.exon21;Parent=Dca60311.1
scaffold916	Augustus	exon	54306	54533	.	-	.	ID=Dca60311.1.exon22;Parent=Dca60311.1
scaffold916	Augustus	exon	54631	54710	.	-	.	ID=Dca60311.1.exon23;Parent=Dca60311.1
scaffold916	Augustus	exon	54976	55084	.	-	.	ID=Dca60311.1.exon24;Parent=Dca60311.1
scaffold916	Augustus	exon	55193	55291	.	-	.	ID=Dca60311.1.exon25;Parent=Dca60311.1
scaffold916	Augustus	exon	55742	55869	.	-	.	ID=Dca60311.1.exon26;Parent=Dca60311.1
scaffold916	Augustus	exon	55973	56051	.	-	.	ID=Dca60311.1.exon27;Parent=Dca60311.1
scaffold916	Augustus	exon	56190	56278	.	-	.	ID=Dca60311.1.exon28;Parent=Dca60311.1
scaffold916	Augustus	exon	57438	57642	.	-	.	ID=Dca60311.1.exon29;Parent=Dca60311.1
scaffold916	Augustus	exon	57866	57910	.	-	.	ID=Dca60311.1.exon30;Parent=Dca60311.1