Carnation DB

Dca60379.1

Annotation

6-exons
f-1
sp|F6HE70_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g01470#GO:0005737;GO:0004813;GO:0005524;GO:0003676;GO:0006419#3F1P1C
AT3G16565.2 | Symbols: | alanine-tRNA ligases;nucleic acid binding;ligases, forming aminoacyl-tRNA and related compounds;nucleotide binding;ATP binding | chr3:5640531-5642675 REVERSE LENGTH=256
Repeat List (scaffold9188)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60379.1	1	179	181	69.06	179	70	4e-67
Target_name	Start	End	Length	Cov(%)
sp\|F6HE70_VITVI	78	254	256	69.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60379.1	1	179	181	63.53	179	64	1e-62
Target_name	Start	End	Length	Cov(%)
AT3G16565.2	78	254	256	69.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9188	Augustus	mRNA	6956	10444	.	-	.	ID=Dca60379.1;Parent=Dca60379
scaffold9188	Augustus	exon	6956	7015	.	-	.	ID=Dca60379.1.exon1;Parent=Dca60379.1
scaffold9188	Augustus	exon	7670	7765	.	-	.	ID=Dca60379.1.exon2;Parent=Dca60379.1
scaffold9188	Augustus	exon	8985	9059	.	-	.	ID=Dca60379.1.exon3;Parent=Dca60379.1
scaffold9188	Augustus	exon	9128	9230	.	-	.	ID=Dca60379.1.exon4;Parent=Dca60379.1
scaffold9188	Augustus	exon	9693	9785	.	-	.	ID=Dca60379.1.exon5;Parent=Dca60379.1
scaffold9188	Augustus	exon	10326	10444	.	-	.	ID=Dca60379.1.exon6;Parent=Dca60379.1