Carnation DB

Dca60392.1

Annotation

13-exons
f-1
sp|D7T0N7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0065g00450#GO:0005737;GO:0005634#0F0P2C
sp|B9SAC2_RICCO#Adhesion regulating molecule, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1237900#GO:0005737;GO:0005634;GO:0000166#1F0P2C
Repeat List (scaffold919)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60392.1	2	320	320	71.25	319	71	2e-125
Target_name	Start	End	Length	Cov(%)
sp\|D7T0N7_VITVI	3	320	320	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60392.1	3	293	320	60	291	66	8e-109
Target_name	Start	End	Length	Cov(%)
AT2G26590.1	2	290	300	96.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold919	Augustus	mRNA	66813	73119	.	+	.	ID=Dca60392.1;Parent=Dca60392
scaffold919	Augustus	exon	66813	66848	.	+	.	ID=Dca60392.1.exon1;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	68497	68589	.	+	.	ID=Dca60392.1.exon2;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	68704	68763	.	+	.	ID=Dca60392.1.exon3;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	69581	69619	.	+	.	ID=Dca60392.1.exon4;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	69712	69786	.	+	.	ID=Dca60392.1.exon5;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	69867	69933	.	+	.	ID=Dca60392.1.exon6;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	70953	71031	.	+	.	ID=Dca60392.1.exon7;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	71732	71850	.	+	.	ID=Dca60392.1.exon8;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	72053	72085	.	+	.	ID=Dca60392.1.exon9;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	72408	72502	.	+	.	ID=Dca60392.1.exon10;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	72595	72672	.	+	.	ID=Dca60392.1.exon11;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	72789	72843	.	+	.	ID=Dca60392.1.exon12;Parent=Dca60392.1
scaffold919	Augus-PASA	exon	72986	73119	.	+	.	ID=Dca60392.1.exon13;Parent=Dca60392.1