Carnation DB

Dca60422.1

Annotation

5-exons
f-1
sp|A5BCQ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025518#GO:0003676;GO:0015074#1F1P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold92)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60422.1	435	1212	1221	31.2	778	47	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BCQ9_VITVI	639	1455	1461	55.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60422.1	444	1211	1221	24.57	768	37	7e-142
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	609	1419	1428	56.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold92	Augustus	mRNA	140712	145130	.	-	.	ID=Dca60422.1;Parent=Dca60422
scaffold92	Augustus	exon	140712	142423	.	-	.	ID=Dca60422.1.exon1;Parent=Dca60422.1
scaffold92	Augustus	exon	142595	143219	.	-	.	ID=Dca60422.1.exon2;Parent=Dca60422.1
scaffold92	Augustus	exon	143643	143699	.	-	.	ID=Dca60422.1.exon3;Parent=Dca60422.1
scaffold92	Augustus	exon	143796	144309	.	-	.	ID=Dca60422.1.exon4;Parent=Dca60422.1
scaffold92	Augustus	exon	144373	145130	.	-	.	ID=Dca60422.1.exon5;Parent=Dca60422.1