Carnation DB

Dca60435.1

Annotation

14-exons
f-1
sp|C5YCA7_SORBI#Putative uncharacterized protein Sb06g001810#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb06g001810#unknown#0F0P0C
Os07t0405100-01 Similar to F-box-like/WD-repeat protein ebi.
Repeat List (scaffold92)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60435.1	1	662	662	57.25	662	57	0
Target_name	Start	End	Length	Cov(%)
sp\|C5YCA7_SORBI	42	602	602	93.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60435.1	1	163	662	13.59	163	53	1e-42
Target_name	Start	End	Length	Cov(%)
Os07t0405100-01	1	170	556	30.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold92	Augustus	mRNA	241845	250762	.	+	.	ID=Dca60435.1;Parent=Dca60435
scaffold92	Augustus	exon	241845	241905	.	+	.	ID=Dca60435.1.exon1;Parent=Dca60435.1
scaffold92	Augustus	exon	243815	243960	.	+	.	ID=Dca60435.1.exon2;Parent=Dca60435.1
scaffold92	Augustus	exon	244058	244712	.	+	.	ID=Dca60435.1.exon3;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	244980	245074	.	+	.	ID=Dca60435.1.exon4;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	245163	245209	.	+	.	ID=Dca60435.1.exon5;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	245850	245991	.	+	.	ID=Dca60435.1.exon6;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	246392	246455	.	+	.	ID=Dca60435.1.exon7;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	246902	247060	.	+	.	ID=Dca60435.1.exon8;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	247173	247294	.	+	.	ID=Dca60435.1.exon9;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	248165	248239	.	+	.	ID=Dca60435.1.exon10;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	248980	249033	.	+	.	ID=Dca60435.1.exon11;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	249117	249190	.	+	.	ID=Dca60435.1.exon12;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	250066	250140	.	+	.	ID=Dca60435.1.exon13;Parent=Dca60435.1
scaffold92	Augus-PASA	exon	250543	250762	.	+	.	ID=Dca60435.1.exon14;Parent=Dca60435.1