Dca60493.1
Annotation
- 2-exons
- f-1
- sp|Q5NRP1_SOLDE#Retrovirus-related Pol polyprotein from transposon TNT 1-94 , putative#Solanum demissum (Wild potato)#ORFNames=SDM1_58t00008#unknown#0F0P0C
- Repeat List (scaffold922)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60493.1 |
1 |
50 |
89 |
35.95 |
50 |
64 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5NRP1_SOLDE |
57 |
105 |
308 |
15.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60493.1 |
1 |
36 |
89 |
25.84 |
36 |
64 |
5e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1022 |
1057 |
1428 |
2.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold922 |
Augustus |
mRNA |
95414 |
96691 |
. |
- |
. |
ID=Dca60493.1;Parent=Dca60493 |
| scaffold922 |
Augustus |
exon |
95414 |
95583 |
. |
- |
. |
ID=Dca60493.1.exon1;Parent=Dca60493.1 |
| scaffold922 |
Augustus |
exon |
96592 |
96691 |
. |
- |
. |
ID=Dca60493.1.exon2;Parent=Dca60493.1 |
