Dca60503.1
Annotation
- 4-exons
- f-1
- sp|Q9SJ83_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g04760#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold9227)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60503.1 |
67 |
276 |
385 |
21.55 |
210 |
38 |
4e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJ83_ARATH |
1 |
206 |
631 |
32.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60503.1 |
23 |
192 |
385 |
14.02 |
170 |
31 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
395 |
563 |
626 |
26.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9227 |
Augustus |
mRNA |
1804 |
4396 |
. |
+ |
. |
ID=Dca60503.1;Parent=Dca60503 |
| scaffold9227 |
Augustus |
exon |
1804 |
1902 |
. |
+ |
. |
ID=Dca60503.1.exon1;Parent=Dca60503.1 |
| scaffold9227 |
Augustus |
exon |
2041 |
2516 |
. |
+ |
. |
ID=Dca60503.1.exon2;Parent=Dca60503.1 |
| scaffold9227 |
Augustus |
exon |
2710 |
2973 |
. |
+ |
. |
ID=Dca60503.1.exon3;Parent=Dca60503.1 |
| scaffold9227 |
Augustus |
exon |
4078 |
4396 |
. |
+ |
. |
ID=Dca60503.1.exon4;Parent=Dca60503.1 |
