Dca60515.1
Annotation
- 2-exons
- f-1
- sp|Q0WMG9_ARATH#Putative uncharacterized protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q9LVQ1_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold9231)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60515.1 |
462 |
618 |
651 |
7.98 |
157 |
31 |
4e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0WMG9_ARATH |
876 |
1045 |
1072 |
15.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60515.1 |
43 |
365 |
651 |
16.89 |
323 |
34 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
230 |
546 |
857 |
36.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9231 |
Augustus |
mRNA |
88 |
2620 |
. |
+ |
. |
ID=Dca60515.1;Parent=Dca60515 |
| scaffold9231 |
Augustus |
exon |
88 |
1186 |
. |
+ |
. |
ID=Dca60515.1.exon1;Parent=Dca60515.1 |
| scaffold9231 |
Augustus |
exon |
1764 |
2620 |
. |
+ |
. |
ID=Dca60515.1.exon2;Parent=Dca60515.1 |
