Carnation DB

Dca60670.1

Annotation

10-exons
f-1
sp|B9MWR8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826955#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:20574634-20577141 FORWARD LENGTH=501
Repeat List (scaffold93)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60670.1	1	502	502	86.05	502	85	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MWR8_POPTR	1	497	497	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60670.1	1	502	502	83.46	502	84	0
Target_name	Start	End	Length	Cov(%)
Os01t0197200-01	1	494	495	99.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold93	Augus-PASA	mRNA	28953	33796	.	+	.	ID=Dca60670.1;Parent=Dca60670
scaffold93	Augus-PASA	exon	28953	29008	.	+	.	ID=Dca60670.1.exon1;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	29093	29355	.	+	.	ID=Dca60670.1.exon2;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	30244	30423	.	+	.	ID=Dca60670.1.exon3;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	30523	30684	.	+	.	ID=Dca60670.1.exon4;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	30895	31049	.	+	.	ID=Dca60670.1.exon5;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	31462	31554	.	+	.	ID=Dca60670.1.exon6;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	32006	32091	.	+	.	ID=Dca60670.1.exon7;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	32179	32405	.	+	.	ID=Dca60670.1.exon8;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	32641	32874	.	+	.	ID=Dca60670.1.exon9;Parent=Dca60670.1
scaffold93	Augus-PASA	exon	33744	33796	.	+	.	ID=Dca60670.1.exon10;Parent=Dca60670.1