Carnation DB

Dca60678.1

Annotation

12-exons
f-1
sp|F6HY26_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g02340#GO:0008442;GO:0050662;GO:0000166;GO:0004616;GO:0006098;GO:0006573#4F2P0C
sp|B1Q3F7_SOLLC#Succinic semialdehyde reductase isofom2#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#Name=LeSSR2#GO:0008442;GO:0050662;GO:0000166;GO:0004616;GO:0006098;GO:0006573#4F2P0C
Repeat List (scaffold93)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60678.1	1	337	342	77.48	337	78	3e-147
Target_name	Start	End	Length	Cov(%)
sp\|F6HY26_VITVI	21	356	365	92.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60678.1	8	337	342	72.8	330	75	6e-141
Target_name	Start	End	Length	Cov(%)
AT1G17650.1	20	351	358	92.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold93	Augus-PASA	mRNA	92817	95767	.	-	.	ID=Dca60678.1;Parent=Dca60678
scaffold93	Augus-PASA	exon	92817	92975	.	-	.	ID=Dca60678.1.exon1;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	93118	93222	.	-	.	ID=Dca60678.1.exon2;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	93349	93421	.	-	.	ID=Dca60678.1.exon3;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	93512	93582	.	-	.	ID=Dca60678.1.exon4;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	93664	93716	.	-	.	ID=Dca60678.1.exon5;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	93951	94011	.	-	.	ID=Dca60678.1.exon6;Parent=Dca60678.1
scaffold93	Augustus	exon	94109	94193	.	-	.	ID=Dca60678.1.exon7;Parent=Dca60678.1
scaffold93	Augustus	exon	94297	94352	.	-	.	ID=Dca60678.1.exon8;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	94445	94520	.	-	.	ID=Dca60678.1.exon9;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	94612	94677	.	-	.	ID=Dca60678.1.exon10;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	95160	95238	.	-	.	ID=Dca60678.1.exon11;Parent=Dca60678.1
scaffold93	Augus-PASA	exon	95623	95767	.	-	.	ID=Dca60678.1.exon12;Parent=Dca60678.1