Dca60702.1
Annotation
- 4-exons
- f-1
- sp|B9GK07_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_847350, POPTRDRAFT_847464#GO:0050660;GO:0008762#2F0P0C
- AT1G30700.1 | Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527
- Repeat List (scaffold93)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60702.1 |
3 |
439 |
871 |
28.24 |
437 |
56 |
1e-141
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GK07_POPTR |
70 |
512 |
526 |
84.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60702.1 |
2 |
436 |
871 |
25.94 |
435 |
51 |
4e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G30700.1 |
70 |
511 |
527 |
83.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold93 |
Augustus |
mRNA |
275425 |
279404 |
. |
+ |
. |
ID=Dca60702.1;Parent=Dca60702 |
| scaffold93 |
Augustus |
exon |
275425 |
276729 |
. |
+ |
. |
ID=Dca60702.1.exon1;Parent=Dca60702.1 |
| scaffold93 |
Augus-PASA |
exon |
277400 |
278083 |
. |
+ |
. |
ID=Dca60702.1.exon2;Parent=Dca60702.1 |
| scaffold93 |
Augus-PASA |
exon |
278647 |
278994 |
. |
+ |
. |
ID=Dca60702.1.exon3;Parent=Dca60702.1 |
| scaffold93 |
Augus-PASA |
exon |
279126 |
279404 |
. |
+ |
. |
ID=Dca60702.1.exon4;Parent=Dca60702.1 |
