Dca60703.1
Annotation
- 4-exons
- f-1
- sp|F6HXQ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g00740#unknown#0F0P0C
- AT3G14172.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:4698860-4704773 REVERSE LENGTH=1270
- Repeat List (scaffold93)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60703.1 |
2 |
665 |
665 |
50.82 |
664 |
45 |
1e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HXQ3_VITVI |
509 |
1257 |
1257 |
59.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60703.1 |
24 |
659 |
665 |
38.19 |
636 |
36 |
2e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14172.1 |
625 |
1269 |
1270 |
50.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold93 |
Augustus |
mRNA |
280571 |
282854 |
. |
- |
. |
ID=Dca60703.1;Parent=Dca60703 |
| scaffold93 |
Augustus |
exon |
280571 |
280635 |
. |
- |
. |
ID=Dca60703.1.exon1;Parent=Dca60703.1 |
| scaffold93 |
Augustus |
exon |
280736 |
280819 |
. |
- |
. |
ID=Dca60703.1.exon2;Parent=Dca60703.1 |
| scaffold93 |
Augustus |
exon |
280902 |
282171 |
. |
- |
. |
ID=Dca60703.1.exon3;Parent=Dca60703.1 |
| scaffold93 |
Augustus |
exon |
282276 |
282854 |
. |
- |
. |
ID=Dca60703.1.exon4;Parent=Dca60703.1 |
