Carnation DB

Dca60725.1

Annotation

7-exons
f-1
sp|B9N1S2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_266818#GO:0015297;GO:0015238#2F0P0C
AT3G26590.1 | Symbols: | MATE efflux family protein | chr3:9761927-9765259 REVERSE LENGTH=500
Repeat List (scaffold9300)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60725.1	1	398	423	66.43	398	71	5e-169
Target_name	Start	End	Length	Cov(%)
sp\|B9N1S2_POPTR	77	470	470	83.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60725.1	1	388	423	63.59	388	70	4e-159
Target_name	Start	End	Length	Cov(%)
AT3G26590.1	103	490	500	77.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9300	Augustus	mRNA	994	3556	.	+	.	ID=Dca60725.1;Parent=Dca60725
scaffold9300	Augustus	exon	994	1529	.	+	.	ID=Dca60725.1.exon1;Parent=Dca60725.1
scaffold9300	Augustus	exon	1985	2071	.	+	.	ID=Dca60725.1.exon2;Parent=Dca60725.1
scaffold9300	Augustus	exon	2360	2416	.	+	.	ID=Dca60725.1.exon3;Parent=Dca60725.1
scaffold9300	Augustus	exon	2515	2753	.	+	.	ID=Dca60725.1.exon4;Parent=Dca60725.1
scaffold9300	Augustus	exon	2958	3076	.	+	.	ID=Dca60725.1.exon5;Parent=Dca60725.1
scaffold9300	Augustus	exon	3231	3317	.	+	.	ID=Dca60725.1.exon6;Parent=Dca60725.1
scaffold9300	Augustus	exon	3410	3556	.	+	.	ID=Dca60725.1.exon7;Parent=Dca60725.1