Carnation DB

Dca60738.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
AT3G24255.1 | Symbols: | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr3:8789471-8793208 FORWARD LENGTH=746
Repeat List (scaffold9307)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60738.1	3	251	339	28.61	249	37	2e-41
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	705	973	1114	24.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60738.1	33	183	339	17.69	151	39	3e-25
Target_name	Start	End	Length	Cov(%)
AT3G24255.1	3	159	746	21.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9307	Augustus	mRNA	5211	9365	.	+	.	ID=Dca60738.1;Parent=Dca60738
scaffold9307	Augustus	exon	5211	5861	.	+	.	ID=Dca60738.1.exon1;Parent=Dca60738.1
scaffold9307	Augustus	exon	5922	6007	.	+	.	ID=Dca60738.1.exon2;Parent=Dca60738.1
scaffold9307	Augustus	exon	8683	8811	.	+	.	ID=Dca60738.1.exon3;Parent=Dca60738.1
scaffold9307	Augustus	exon	9115	9160	.	+	.	ID=Dca60738.1.exon4;Parent=Dca60738.1
scaffold9307	Augustus	exon	9258	9365	.	+	.	ID=Dca60738.1.exon5;Parent=Dca60738.1