Carnation DB

Dca60745.1

Annotation

12-exons
f-1
sp|D7TD90_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0057g01220#GO:0016021;GO:0006810#0F1P1C
sp|B9S9V9_RICCO#Coated vesicle membrane protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0522630#GO:0016021;GO:0016760;GO:0007047;GO:0030244;GO:0006810#1F3P1C
Repeat List (scaffold931)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60745.1	219	420	420	36.66	202	76	1e-85
Target_name	Start	End	Length	Cov(%)
sp\|D7TD90_VITVI	12	214	214	94.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60745.1	219	420	420	33.57	202	70	1e-81
Target_name	Start	End	Length	Cov(%)
AT3G07680.1	6	208	208	97.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold931	Augus-PASA	mRNA	63489	72831	.	-	.	ID=Dca60745.1;Parent=Dca60745
scaffold931	Augus-PASA	exon	63489	63622	.	-	.	ID=Dca60745.1.exon1;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	64155	64262	.	-	.	ID=Dca60745.1.exon2;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	64362	64548	.	-	.	ID=Dca60745.1.exon3;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	66170	66370	.	-	.	ID=Dca60745.1.exon4;Parent=Dca60745.1
scaffold931	Augustus	exon	69422	69475	.	-	.	ID=Dca60745.1.exon5;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	69873	69943	.	-	.	ID=Dca60745.1.exon6;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	70140	70185	.	-	.	ID=Dca60745.1.exon7;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	70765	70825	.	-	.	ID=Dca60745.1.exon8;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	71227	71320	.	-	.	ID=Dca60745.1.exon9;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	71664	71698	.	-	.	ID=Dca60745.1.exon10;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	71796	71981	.	-	.	ID=Dca60745.1.exon11;Parent=Dca60745.1
scaffold931	Augus-PASA	exon	72746	72831	.	-	.	ID=Dca60745.1.exon12;Parent=Dca60745.1