Carnation DB

Dca60755.1

Annotation

7-exons
f-1
sp|B9HJ89_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_418950#GO:0008270#1F0P0C
sp|G7IAT6_MEDTR#E3 ubiquitin-protein ligase MARCH2#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_1g108490#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold9313)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60755.1	1	226	266	49.24	226	56	4e-68
Target_name	Start	End	Length	Cov(%)
sp\|B9HJ89_POPTR	1	233	233	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60755.1	1	227	266	45.11	227	52	2e-60
Target_name	Start	End	Length	Cov(%)
AT2G01275.1	1	226	259	87.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9313	Augustus	mRNA	6222	7770	.	+	.	ID=Dca60755.1;Parent=Dca60755
scaffold9313	Augustus	exon	6222	6467	.	+	.	ID=Dca60755.1.exon1;Parent=Dca60755.1
scaffold9313	Augustus	exon	6664	6735	.	+	.	ID=Dca60755.1.exon2;Parent=Dca60755.1
scaffold9313	Augustus	exon	6885	6952	.	+	.	ID=Dca60755.1.exon3;Parent=Dca60755.1
scaffold9313	Augustus	exon	7033	7171	.	+	.	ID=Dca60755.1.exon4;Parent=Dca60755.1
scaffold9313	Augustus	exon	7277	7354	.	+	.	ID=Dca60755.1.exon5;Parent=Dca60755.1
scaffold9313	Augustus	exon	7442	7531	.	+	.	ID=Dca60755.1.exon6;Parent=Dca60755.1
scaffold9313	Augustus	exon	7663	7770	.	+	.	ID=Dca60755.1.exon7;Parent=Dca60755.1