Carnation DB

Dca60778.1

Annotation

5-exons
f-1
sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold932)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60778.1	148	460	473	24.1	313	33	1e-42
Target_name	Start	End	Length	Cov(%)
sp\|Q6L4J8_SOLDE	81	419	1065	31.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60778.1	1	120	473	13.53	120	50	5e-26
Target_name	Start	End	Length	Cov(%)
AT4G36490.1	415	543	543	23.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold932	Augustus	mRNA	109298	111949	.	+	.	ID=Dca60778.1;Parent=Dca60778
scaffold932	Augustus	exon	109298	109570	.	+	.	ID=Dca60778.1.exon1;Parent=Dca60778.1
scaffold932	Augustus	exon	109752	109826	.	+	.	ID=Dca60778.1.exon2;Parent=Dca60778.1
scaffold932	Augustus	exon	110463	110528	.	+	.	ID=Dca60778.1.exon3;Parent=Dca60778.1
scaffold932	Augustus	exon	110856	111276	.	+	.	ID=Dca60778.1.exon4;Parent=Dca60778.1
scaffold932	Augustus	exon	111363	111949	.	+	.	ID=Dca60778.1.exon5;Parent=Dca60778.1