Carnation DB

Dca60815.1

Annotation

5-exons
f-1
sp|B9GRT3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_644687#unknown#0F0P0C
AT4G01560.1 | Symbols: MEE49 | Ribosomal RNA processing Brix domain protein | chr4:677266-679164 REVERSE LENGTH=343
Repeat List (scaffold9337)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60815.1	14	120	120	64.16	107	72	2e-39
Target_name	Start	End	Length	Cov(%)
sp\|B9GRT3_POPTR	112	218	361	29.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60815.1	14	120	120	63.33	107	72	2e-39
Target_name	Start	End	Length	Cov(%)
AT4G01560.1	107	213	343	31.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9337	Augustus	mRNA	7990	9893	.	-	.	ID=Dca60815.1;Parent=Dca60815
scaffold9337	Augustus	exon	7990	8060	.	-	.	ID=Dca60815.1.exon1;Parent=Dca60815.1
scaffold9337	Augustus	exon	8201	8270	.	-	.	ID=Dca60815.1.exon2;Parent=Dca60815.1
scaffold9337	Augustus	exon	8373	8456	.	-	.	ID=Dca60815.1.exon3;Parent=Dca60815.1
scaffold9337	Augustus	exon	8707	8802	.	-	.	ID=Dca60815.1.exon4;Parent=Dca60815.1
scaffold9337	Augustus	exon	9852	9893	.	-	.	ID=Dca60815.1.exon5;Parent=Dca60815.1