Carnation DB

Dca60903.1

Annotation

7-exons
f-1
sp|B9N9I9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_585895#GO:0016020#0F0P1C
AT1G17820.1 | Symbols: | Putative integral membrane protein conserved region (DUF2404) | chr1:6131751-6135115 REVERSE LENGTH=803
Repeat List (scaffold937)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60903.1	35	743	743	48.99	709	50	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N9I9_POPTR	70	802	802	91.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60903.1	35	743	743	44.95	709	45	6e-172
Target_name	Start	End	Length	Cov(%)
AT1G17820.1	70	802	803	91.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold937	Augus-PASA	mRNA	104344	111694	.	-	.	ID=Dca60903.1;Parent=Dca60903
scaffold937	Augus-PASA	exon	104344	104940	.	-	.	ID=Dca60903.1.exon1;Parent=Dca60903.1
scaffold937	Augustus	exon	105986	106180	.	-	.	ID=Dca60903.1.exon2;Parent=Dca60903.1
scaffold937	Augustus	exon	106976	107070	.	-	.	ID=Dca60903.1.exon3;Parent=Dca60903.1
scaffold937	Augustus	exon	107673	108039	.	-	.	ID=Dca60903.1.exon4;Parent=Dca60903.1
scaffold937	Augustus	exon	108589	109240	.	-	.	ID=Dca60903.1.exon5;Parent=Dca60903.1
scaffold937	Augustus	exon	110424	110647	.	-	.	ID=Dca60903.1.exon6;Parent=Dca60903.1
scaffold937	Augustus	exon	111593	111694	.	-	.	ID=Dca60903.1.exon7;Parent=Dca60903.1