Carnation DB

Dca60912.1

Annotation

8-exons
f-1
sp|B9N1Z2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580758#GO:0016021#0F0P1C
Os01t0604700-01 Similar to cDNA clone:001-043-A08, full insert sequence.
Repeat List (scaffold9372)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60912.1	1	290	290	71.72	290	72	1e-115
Target_name	Start	End	Length	Cov(%)
sp\|B9N1Z2_POPTR	60	345	345	82.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60912.1	1	290	290	70	290	70	2e-111
Target_name	Start	End	Length	Cov(%)
AT3G02420.1	60	348	348	83.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9372	Augustus	mRNA	1222	3332	.	+	.	ID=Dca60912.1;Parent=Dca60912
scaffold9372	Augustus	exon	1222	1342	.	+	.	ID=Dca60912.1.exon1;Parent=Dca60912.1
scaffold9372	Augustus	exon	1450	1562	.	+	.	ID=Dca60912.1.exon2;Parent=Dca60912.1
scaffold9372	Augustus	exon	1706	1831	.	+	.	ID=Dca60912.1.exon3;Parent=Dca60912.1
scaffold9372	Augustus	exon	1933	2053	.	+	.	ID=Dca60912.1.exon4;Parent=Dca60912.1
scaffold9372	Augustus	exon	2154	2238	.	+	.	ID=Dca60912.1.exon5;Parent=Dca60912.1
scaffold9372	Augustus	exon	2442	2555	.	+	.	ID=Dca60912.1.exon6;Parent=Dca60912.1
scaffold9372	Augustus	exon	2637	2676	.	+	.	ID=Dca60912.1.exon7;Parent=Dca60912.1
scaffold9372	Augustus	exon	3180	3332	.	+	.	ID=Dca60912.1.exon8;Parent=Dca60912.1