Carnation DB

Dca60974.1

Annotation

6-exons
f-1
sp|B9HM18_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_563817#unknown#0F0P0C
sp|B9SGF0_RICCO#Erythroblast macrophage protein emp, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0744890#unknown#0F0P0C
Repeat List (scaffold94)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60974.1	1	246	265	66.79	246	72	2e-97
Target_name	Start	End	Length	Cov(%)
sp\|B9HM18_POPTR	1	239	412	58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60974.1	1	249	265	60.75	249	65	2e-90
Target_name	Start	End	Length	Cov(%)
AT3G55070.1	1	242	418	57.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold94	Augus-PASA	mRNA	11655	15902	.	+	.	ID=Dca60974.1;Parent=Dca60974
scaffold94	Augus-PASA	exon	11655	11987	.	+	.	ID=Dca60974.1.exon1;Parent=Dca60974.1
scaffold94	Augus-PASA	exon	12315	12509	.	+	.	ID=Dca60974.1.exon2;Parent=Dca60974.1
scaffold94	Augus-PASA	exon	13228	13350	.	+	.	ID=Dca60974.1.exon3;Parent=Dca60974.1
scaffold94	Augustus	exon	14692	14776	.	+	.	ID=Dca60974.1.exon4;Parent=Dca60974.1
scaffold94	Augustus	exon	14850	14877	.	+	.	ID=Dca60974.1.exon5;Parent=Dca60974.1
scaffold94	Augustus	exon	15869	15902	.	+	.	ID=Dca60974.1.exon6;Parent=Dca60974.1