Dca61104.1
Annotation
- 3-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold944)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61104.1 |
14 |
1422 |
1448 |
47.51 |
1409 |
48 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
30 |
1471 |
1501 |
96.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca61104.1 |
904 |
1405 |
1448 |
16.78 |
502 |
48 |
2e-141
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
50 |
553 |
1262 |
39.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold944 |
Augustus |
mRNA |
69473 |
75836 |
. |
- |
. |
ID=Dca61104.1;Parent=Dca61104 |
| scaffold944 |
Augustus |
exon |
69473 |
69553 |
. |
- |
. |
ID=Dca61104.1.exon1;Parent=Dca61104.1 |
| scaffold944 |
Augustus |
exon |
71490 |
74966 |
. |
- |
. |
ID=Dca61104.1.exon2;Parent=Dca61104.1 |
| scaffold944 |
Augustus |
exon |
75048 |
75836 |
. |
- |
. |
ID=Dca61104.1.exon3;Parent=Dca61104.1 |
